Clinical trial

2nd Clinical trial testing gene therapy in adrenoleukodystrophy

Florian Eichler, M.D., Christine Duncan, M.D., Patricia L. Musolino, M.D., Ph.D., Paul J. Orchard, M.D., Satiro De Oliveira, M.D., Adrian J. Thrasher, M.D., Myriam Armant, Ph.D., Colleen Dansereau, M.S.N., R.N., Troy C. Lund, M.D., Weston P. Miller, M.D., Gerald V. Raymond, M.D., Raman Sankar, M.D., Ami J. Shah, M.D., Caroline Sevin, M.D., Ph.D., H. Bobby Gaspar, M.D., Paul Gissen, M.D., Hernan Amartino, M.D., Drago Bratkovic, M.D., Nicholas J.C. Smith, M.D., Asif M. Paker, M.D., Esther Shamir, M.P.H., Tara O’Meara, B.S., David Davidson, M.D., Patrick Aubourg, M.D., et David A. Williams, M.D.– 2017

Description of the project

A clinical trial carried out in several countries has just ended. This test, called ’open phase 2-3’, confirms the results obtained in 2009 in France by the teams of Patrick Aubourg and Nathalie Cartier. Florian Eichler, principal investigator of the study, presents the results:

“Hematopoietic stem cell gene therapy for cerebral adrenoleukodystrophy”

“Cerebral adrenoleukodystrophy (ALD) affects 30 to 40% of boys aged 4 to 8 born with a mutation in the ABCD1 gene. These boys with ALD quickly begin to lose their walk and speech. In the New England Journal of Medicine, researchers just described a clinical trial using a lentivirus to infuse a normal copy of the ABCD1 gene into the bone marrow of boys with ALD. The corrected protein stopped the progression of the disease. It is the first effective gene therapy treatment to stop fatal brain disease.

Hematopoietic stem cell gene therapy for cerebral adrenoleukodystrophy

Florian Eichler, MD, Christine Duncan, MD, Patricia L. Musolino, MD, Ph.D., Paul J. Orchard, MD, Satiro De Oliveira, MD, Adrian J. Thrasher, MD, Myriam Armant, Ph.D., Colleen Dansereau, MSN, RN, Troy C. Lund, MD, Weston P. Miller, MD, Gerald V. Raymond, MD, Raman Sankar, MD, Ami J. Shah, MD, Caroline Sevin, MD, Ph.D., H. Bobby Gaspar, MD, Paul Gissen, MD, Hernan Amartino, MD, Drago Bratkovic, MD, Nicholas JC Smith, MD, Asif M. Paker, MD, Esther Shamir, MPH, Tara O’Meara, BS, David Davidson, MD, Patrick Aubourg, MD, and David A. Williams, MD

CONTEXT

In X-linked adrenoleukodystrophy, mutations in the ABCD1 gene lead to loss of function of the ALD protein. Cerebral adrenoleukodystrophy is characterised by demyelination and neurodegeneration. The progression of the disease, which leads to loss of neurological function and death, can only be stopped with an allogeneic hematopoietic stem cell transplant.

METHODS

We recruited boys with cerebral adrenoleukodystrophy in a phase 2-3, open-label, single-arm safety and efficacy study. When screened, patients had to be at an early stage of the disease and show a signal on magnetic resonance imaging (MRI) with the contrast agent gadolinium. The experimental therapy involved the infusion of autologous CD34 + cells transduced with the lentiviral vector elivaldogene tavalentivec (Lenti-D). In this interim analysis, patients were assessed for graft-versus-host disease onset, death, and major functional disabilities, as well as for changes in neurological function and the extent of visible lesions by MRI. The main end goal  was to be alive and have no major functional disability 24 months after the infusion.

RESULTS

A total of 17 boys received Lenti-D gene therapy. At the time of the interim analysis, the median follow-up was 29.4 months (range: 21.6 to 42.0 months). Following the transplant, all patients had cells marked with the gene, with no evidence of preferential integration near known oncogenes or clonal outgrowth. A measurable ALD protein was observed in all patients. No treatment-related death or graft-versus-host disease has been reported; 15 of 17 patients (88%) were alive and without major functional disability, with minimal clinical symptoms. One patient, who had had rapid neurological deterioration, died from the progression of the disease. Another patient, who had signs of disease progression on MRI, withdrew from the study to undergo an allogeneic stem cell transplant and later died of transplant-related complications.

CONCLUSIONS

Initial results from this study suggest that Lenti-D gene therapy may be a safe and effective alternative to allogeneic stem cell transplantation in boys with early-stage cerebral adrenoleukodystrophy. Further follow-up is necessary to fully assess the duration of response and long-term safety. (Funded by Bluebird Bio et al., STARBEAM ClinicalTrials.gov, NCT01896102; ClinicalTrialsRegister.eu number, 2011-001953-10.)

Reference: Eichler, F., Duncan, C., Musolino, PL, Orchard, PJ, De Oliveira, S., Thrasher, AJ, Armant, M., Dansereau, C., Lund, TC, Miller, WP, et al . (2017). Hematopoietic Stem-Cell Gene Therapy for Cerebral Adrenoleukodystrophy. N. Engl. J. Med. Oct 26; 377 (17): 1630-1638

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Brain organoids to evaluate a new therapeutic strategy for Adrenoleukodystrophy

Stephan Kemp – Department of Genetic Metabolic Diseases and Vivi Heine, Département de pédiatrie, Centre médical universitaire VU, Université d’Amsterdam, Amsterdam, Pays-Bas – ELA2019‐020C2

Description of the project

X-linked adrenoleukodystrophy (ALD) is the most common leukodystrophy. All ALD patients have a mutation in ABCD1 and accumulate very long-chain fatty acid (VLCFA) in tissues, including brain and spinal cord. In adulthood, virtually all males and >80% of women develop chronically progressive myelopathy (adrenomyeloneuropathy) for which no disease-modifying therapy is available. Hematopoietic stem cell transplantation (HSCT) and ex vivo autologous gene therapy are effective in treating cerebral ALD, but only in the early stages of brain inflammation. Unfortunately, HSCT-treated patients can still develop myelopathy in adulthood, because HSCT is only effective at halting the inflammatory component of the disease without addressing the underlying biochemical defect. This therapeutic gap highlights the need to develop effective treatments aimed at the normalization of VLCFA levels in the brain and spinal cord. Using skin cells from ALD patients we have demonstrated that saturated VLCFA induce cellular stress, with prolonged exposure resulting in cell death. This effect is not observed with mono-unsaturated VLCFA. We identified small-molecules that activate an alternative metabolic route that converts saturated to mono-unsaturated VLCFA.

Treatment of ALD cells completely corrects VLCFA levels. Treatment of the ALD mouse with these molecules added to their food results in a reduction in adrenals, spinal cord and brain. Unfortunately, are these small molecules not specific enough and cause side-effects. We are currently searching for more specific small-molecules. When found, these small-molecules must be tested in an ALD disease model. In this project we will develop a novel ALD disease model.

We already generated stem cells from control and ALD skin cells. These stem cells can be used to generate organoids, which is a miniaturized and simplified version of an organ. Interestingly, with the proper tools we can use these stem cells to generate brain organoids.

The availability of control and ALD brain organoids would be a major step forwards in the development of a therapy for ALD and other leukodystrophies. Organoids will lead to a reduction in animal studies and they are a preclinical model that better reflects the disease.

Project financed by ELA up to: 89 345 €

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AAV‐mediated Gene Delivery for the Motor and Sensory Phenotype of Adrenomyeloneuropathy

Florian Eichler – Department of Neurology, Massachusetts General Hospital, Harvard Medical School, Boston MA USA – ELA2019‐012I2

Description of the project

Adrenomyeloneuropathy is a debilitating lifelong disorder that currently has not treatments available. As an inherited disorder, gene correction is clearly necessary to alter the trajectory of disease burden. We have a developed an approach to deliver a healthy copy of the faulty gene directly into brain and spinal cord.

We have tested this in mice with the disease and have made key insights into a cell type critical to this process: neurons in the brain and alongside the spinal cord. With this knowledge we are now improving gene delivery using new viral vectors.

Importantly we have also developed industry partnerships that can help with manufacturing and setting up future clinical trials. Beyond creating a much-needed treatment, we are also through our studies gaining a better understanding of the disease biology of adrenomyeloneuropathy.

Project financed by ELA up to: 92 300 €

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Allele‐specific siRNAs as therapeutic option for ADLD: in vitro preclinical validation on unique human experimental models

Annalisa Buffo – Neuroscience Rita Levi Montalcini, University of Torino, Orbassano Torino, Italv – ELA2019-006I2

Description of the project

The adult onset autosomal dominant leukodystrophy or ADLD, is a genetic, fatal and incurable neurodegenerative disease. It is characterized by a loss of the so-called “white matter” of the central nervous system and is manifested by movement disorders and severe alterations of the autonomic nervous system.

The genetic cause is the presence of three copies, instead of the two normally present, of the gene that contains the instructions to produce the lamin B1 (LMNB1) protein, which belongs to a group of structural proteins (lamins) forming the nuclear membrane of the cell. In patients, Lamin B1 accumulates into the cells causing the neurodegeneration.

Through our project, we will provide the first therapeutic option for ADLD, developing a technique called “allele-specific silencing”. By using small molecules of RNA called “siRNAs”, we will be able to “turn off” one of the three copies of the gene, restoring the physiological lamin B1 levels, and in turn avoiding the accumulation of the protein and the disease.

To validate our therapeutic strategy mediated by siRNAs, we will generate two innovative in vitro models based on induced pluripotent stem cells (iPSC) derived from ADLD patients that will allow an authentic “disease-in-a-dish” approach. The iPSCs are a highly versatile tool, since they can be used to recreate in the laboratory different types of cells normally difficult or impossible to obtain from a patient, such as those of the central nervous system. In these models we will test genetic products already developed in our lab to measure efficacy and potency on LMNB1 reduction and the absence of negative or dangerous effects. Our project is intended to pave the way towards a therapy for ADLD and also establish distinctive human ADLD-relevant models and therapeutic approaches that may have great importance for future studies non only on ADLD but also on the physiopathology and therapy of other leukodystrophies and genetic diseases.

Project financed by ELA up to: 100 000 €

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Evaluating glial and neuronal GFAP, MCP-1 and NfL as blood biomarkers for onset and disease severity in cerebral adrenoleukodystrophy

Johannes Berger – Pathobiology of the Nervous System, Center for Brain Research, Medical University of Vienna, Austria ELA2020-003C1

Description of the project

With a combined incidence of 1:14,700, X-ALD is the most common monogenetically inherited leukodystrophy. The disease is caused by mutations of the peroxisomal very long-chain fatty acid transporter ABCD1 that normally imports very long-chain fatty acids into the peroxisome for degradation. Accordingly, loss of ABCD1 function results in accumulation of very long-chain fatty acids in the plasma and body fluids of affected patients. X-ALD shows a striking phenotypic heterogeneity with inflammatory cerebral X-ALD (CALD) being the most severe form. In order to be treatable by bone marrow transplantation or gene therapy, CALD has to be recognized in its earliest stages.

The ultimate goal of this research project is to identify an easily accessible blood biomarker indicative for onset and progression of CALD. If successful, the identified blood biomarker could provide valuable information for decisions on clinical interventions and could also be used as treatment efficacy marker in clinical trials targeting CALD.

Project financed by ELA up to: 29 000 €

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SCD1-mediated metabolic rerouting of very long-chain fatty acids synthesis in adrenoleukodystrophy: a novel therapeutic strategy

Stephan Kemp and Noam Zelcer – UMC Universitv of Amsterdam, Amsterdam, The Netherlands – ELA2022-011C2

Description of the project

X-linked adrenoleukodystrophy (ALD) is the most common leukodystrophy. All ALD patients have a mutation in the ABCD1 gene that leads to a build-up of saturated very long-chain fatty acid (VLCFA) in tissues, including adrenal glands, spinal cord and brain. ALD is characterized by a striking and unpredictable clinical spectrum, even within families. In childhood, around 50% of affected boys develop adrenal disease before the age of 10 and 30-35% of affected boys develop a fatal inflammatory brain disease (cerebral ALD). If ALD is diagnosed in an early stage, cerebral ALD can be halted or reversed by a bone-marrow transplant. In adulthood, virtually all males and >80% of women develop a chronically slow progressive spinal cord disease (myeloneuropathy) for which no disease modifying therapy is available. Unfortunately, transplanted boys can still develop spinal cord disease in adulthood, because the transplant is only effective at halting the inflammatory component of the disease without addressing the underlying biochemical defect. This therapeutic gap highlights the need to develop effective treatments aimed at the normalization of VLCFA levels in the brain and spinal cord.

Using skin cells from ALD patients we have demonstrated that saturated VLCFA induce cellular stress, with prolonged exposure resulting in cell death. Remarkably, this is not observed with mono-unsaturated VLCFA (fatty acids with a double bond in the fatty acid chain). The enzyme stearoyl-CoA desaturase-1 (SCD1) coverts saturated fatty acids into mono-unsaturated fatty acids. In a previous ELA supported project we identified and characterized the drug TO901317 (an LXR agonist) as a small-molecule that activates SCD1 activity. Treatment of ALD cells with TO901317 completely corrects VLCFA levels and treatment of the ALD mouse with TO901317 added to the food resulted in a reduction in VLCFA levels in adrenals, spinal cord and brain.

Unfortunately, TO901317 (and other LXR agonists) as potential treatment for ALD have notable limitations due to off-target effects that result in serious side effects. This is largely due to LXR agonists not being specific for SCD1. We therefore hypothesize that specifically increasing SCD1 activity will circumvent the detrimental effect of LXR activation and offer a therapeutic strategy to counteract VLCFA-induced lipotoxicity in ALD.

Strategies to specifically increase SCD1, either pharmacologically or genetically have not been reported to date. Therefore, the overall goal of the proposal is to identify genetic and pharmacological regulators of SCD1 abundance and/or activity. Specifically, in this project we aim to:

  • Generate cell lines in which the SCD1 enzyme is tagged with a fluorescent protein to allow monitoring of SCD1 in
  1. live cells at a single cell resolution.
  • Map enzymes that control SCD1 abundance using a genome-wide CRISPR/Cas9 genetic screen.
  • Identify small molecules that increase SCD1 abundance and activity. Addressing these aims will increase our basic understanding of VLCFA metabolism in ALD.

Moreover, results from these experiments have the potential to inform on novel therapeutic strategies to treat ALD patients.

Project financed by ELA up to: 97 045 €

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